The manual for the latest version of Geneious Prime can be downloaded as a PDF or read online.
The manual is also available for download from within Geneious. Go to Help→Online Resources→User Manual and you'll get the current manual for your version of Geneious.
Manuals are also available for the Microsatellite plugin and Sequence Classifier plugin.
Past manual available where?
To find the manual for the version of Geneious you are using, open Geneious and go to Help ->Online Resources->Download Manual
If you want the manual for a different version, just contact us by submitting a support request and we'll send you the appropriate link.